BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B06SP1|AL428332
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1764 1746 0.0
>3x_Contig1764
Length = 22510
Score = 1746 bits (880), Expect = 0.0
Identities = 881/882 (99%)
Strand = Plus / Plus
Query: 1 atcctcagcgacaatttccggttactgtcgtttgagatttttctatattaaataaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5346 atcctcagcgacaatttccggttactgtcgtttgagatttttctatattaaataaaactg 5405
Query: 61 ggacatttctctcacagtgtgttagttcattgcaaagcttcaacaaatggaataagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5406 ggacatttctctcacagtgtgttagttcattgcaaagcttcaacaaatggaataagaaat 5465
Query: 121 ggacaacagcagcagcctactgtgtcactattggtagcatctcgaatcgcgtgtctttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5466 ggacaacagcagcagcctactgtgtcactattggtagcatctcgaatcgcgtgtctttcg 5525
Query: 181 tataaaagtttccattatttggccgataccgaaatgcaaacaaaaaaaaaattagattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5526 tataaaagtttccattatttggccgataccgaaatgcaaacaaaaaaaaaattagattta 5585
Query: 241 acgaacaatttaaaagaagaaaagttgagctcattctgctttaaagaatcttcgaaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5586 acgaacaatttaaaagaagaaaagttgagctcattctgctttaaagaatcttcgaaaacc 5645
Query: 301 atcttgcggaataaagctaagcgtatgcatcctgtaggacgtgcaggaatttcaaactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5646 atcttgcggaataaagctaagcgtatgcatcctgtaggacgtgcaggaatttcaaactga 5705
Query: 361 accttcacttagcggaccaacagaagagatgtcaactcaaacttctacctatgcggacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5706 accttcacttagcggaccaacagaagagatgtcaactcaaacttctacctatgcggacct 5765
Query: 421 tgtgcattcattagaacaagatgacatcttagaaaagtttcctgaggtcatcccattgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5766 tgtgcattcattagaacaagatgacatcttagaaaagtttcctgaggtcatcccattgaa 5825
Query: 481 caacagaccaaatacacattctactgaatcctctggcgaaacggataatttgctagatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5826 caacagaccaaatacacattctactgaatcctctggcgaaacggataatttgctagatgg 5885
Query: 541 atatgatgaggaacaaatcagattgatgaatgaraattgtatagttttggattggaacga 600
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5886 atatgatgaggaacaaatcagattgatgaatgaaaattgtatagttttggattggaacga 5945
Query: 601 tactgcgattggtgctggtacaaaaaaactatgtcatttgatggagaacatcaaccaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5946 tactgcgattggtgctggtacaaaaaaactatgtcatttgatggagaacatcaaccaagg 6005
Query: 661 tctattacatcgcgcattttctgtgttcctttttgacagcgatggtaaattactattaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6006 tctattacatcgcgcattttctgtgttcctttttgacagcgatggtaaattactattaca 6065
Query: 721 acaacgtgccactgaaaagattacttttgcagatctttggaccaacacatgctgttcaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6066 acaacgtgccactgaaaagattacttttgcagatctttggaccaacacatgctgttcaca 6125
Query: 781 ccctttgtgcgtcgatgacgaacttggactgaacggctctttggaaagtaaaatagaggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6126 ccctttgtgcgtcgatgacgaacttggactgaacggctctttggaaagtaaaatagaggg 6185
Query: 841 tgccagaactgcagcagttagaaaattggaacatgaactagg 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6186 tgccagaactgcagcagttagaaaattggaacatgaactagg 6227
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8594
Number of Sequences: 1807
Number of extensions: 8594
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)